Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold363
Parameters: 2 7 7 80 10 50 1000
Length:  552799

Tables:   1   2   3   4   

This is table  4  of  4  ( 366 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
551221--551255
4
8.8
4
93
0
61
51
0
2
45
1.16
551731--551782
27
1.9
27
88
7
79
46
1
1
50
1.23
551798--551870
19
3.8
18
74
18
67
36
1
1
60
1.14
552677--552706
15
2.0
15
93
0
51
30
0
0
70
0.88
552654--552707
9
6.3
9
76
18
53
22
0
0
77
0.76
552664--552711
25
2.0
25
87
4
71
29
0
0
70
0.87

Tables:   1   2   3   4

The End!