Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold399
Parameters: 2 7 7 80 10 50 1000
Length:  184626

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
138983--139435
227
2.0
226
86
2
622
37
21
32
9
1.85
153134--153194
20
3.0
20
95
0
113
22
26
9
40
1.85
157387--157582
50
3.9
50
90
0
302
31
19
16
31
1.95
159863--159901
2
19.5
2
100
0
78
48
0
0
51
1.00
160420--160462
2
22.0
2
95
4
79
48
0
0
51
1.00
160655--160695
2
21.0
2
90
5
66
46
0
0
53
1.00
160645--160692
23
2.1
23
92
7
80
41
2
0
56
1.11
160993--161060
29
2.4
28
75
7
66
47
13
1
38
1.52
165065--165120
27
2.0
28
86
3
78
28
16
8
46
1.77
170896--170930
16
2.2
16
100
0
70
40
5
11
42
1.65
172970--173030
29
2.1
30
84
3
79
40
11
1
45
1.50
173046--173097
21
2.5
21
87
9
79
57
1
1
38
1.21
173185--173215
2
15.5
2
100
0
62
51
0
0
48
1.00
173502--173612
43
2.6
43
77
8
127
36
10
13
39
1.80
173599--173691
42
2.2
42
84
3
116
34
6
16
43
1.73
178980--179012
2
16.5
2
100
0
66
51
0
0
48
1.00
180632--180706
36
2.1
36
94
0
132
45
8
10
36
1.68
180635--180695
20
3.2
20
67
32
62
40
8
11
39
1.71

Tables:   1   2

The End!