Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold428
Parameters: 2 7 7 80 10 50 1000
Length:  186993

Tables:   1   2   

This is table  2  of  2  ( 160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
150813--150866
6
8.8
6
77
18
58
61
0
0
38
0.96
150810--150866
20
2.8
21
82
12
57
59
0
0
40
0.97
150839--150924
23
3.7
23
67
21
54
47
0
0
52
1.00
150848--150937
23
3.9
24
77
15
82
45
0
0
54
0.99
150831--150934
16
6.2
17
69
15
58
46
0
0
53
1.00
150970--151069
12
8.2
12
68
20
55
59
1
0
40
1.04
151056--151136
18
4.9
17
69
13
53
45
3
0
50
1.19
151333--151419
15
5.7
15
66
16
54
43
0
0
56
0.99
151380--151472
42
2.2
43
80
14
113
39
0
0
60
0.97
151654--151695
15
2.9
14
89
10
59
52
0
2
45
1.13
151967--152093
63
2.0
63
89
3
193
40
16
16
25
1.89
152424--152463
7
5.4
8
82
11
50
37
0
0
62
0.95
152425--152476
15
3.4
16
79
15
56
36
0
1
61
1.07
152467--152512
24
2.0
23
86
4
65
26
2
4
67
1.21
152657--152705
23
2.0
24
84
11
64
36
2
0
61
1.08
153104--153166
2
31.5
2
90
6
101
47
1
1
49
1.20
153375--153447
29
2.6
27
82
10
83
39
0
0
60
0.97
153863--153913
21
2.3
22
80
12
61
45
0
0
54
0.99
153846--153925
36
2.2
36
78
12
85
43
0
0
56
0.99
154788--154835
24
2.0
24
88
8
71
41
0
2
56
1.11
154788--154853
25
2.7
24
84
11
73
39
0
1
59
1.07
154893--154983
17
5.6
18
69
19
67
51
0
3
45
1.17
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
155044--155125
12
6.7
13
72
18
52
62
0
1
36
1.03
159913--159959
9
5.3
9
82
12
53
61
2
0
36
1.08
159927--159960
12
2.8
12
90
4
50
67
0
0
32
0.91
159918--159984
34
2.0
33
82
8
82
61
0
0
38
0.96
159918--159959
17
2.4
18
80
11
52
64
0
0
35
0.94
159972--160003
16
2.0
16
93
0
55
53
3
0
43
1.16
159958--160014
28
2.0
28
86
6
80
54
3
1
40
1.28
163046--163074
6
4.8
6
100
0
58
31
0
0
68
0.89
166906--167089
92
2.0
92
95
2
334
32
13
17
36
1.88
173552--173579
2
14.0
2
100
0
56
50
0
0
50
1.00
174130--174182
6
8.5
6
76
15
54
66
0
0
33
0.92
174140--174182
11
4.1
11
80
20
56
67
0
0
32
0.91
174314--174387
34
2.1
36
92
5
125
39
2
2
55
1.28
181884--181933
7
7.1
7
82
13
50
40
0
0
60
0.97
181984--182019
18
2.1
17
89
5
54
33
0
0
66
0.92
182269--182307
20
2.0
20
85
10
53
64
0
0
35
0.94
182981--183077
11
8.5
12
67
26
52
35
0
1
63
1.01
183971--184058
39
2.2
39
84
9
108
21
2
9
67
1.30

Tables:   1   2

The End!