Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold447
Parameters: 2 7 7 80 10 50 1000
Length:  214352

Tables:   1   2   

This is table  2  of  2  ( 149 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
174212--174295
27
3.0
28
86
6
109
23
30
19
26
1.98
174270--174440
52
3.3
52
78
10
172
29
26
12
30
1.93
174101--174495
213
1.9
212
88
3
598
29
26
13
31
1.94
183652--183723
27
2.6
27
80
2
72
6
9
29
54
1.59
183658--183723
9
7.3
9
75
0
51
7
7
28
56
1.55
183691--183747
21
2.7
21
80
0
60
7
12
29
50
1.66
184266--184312
7
6.7
7
100
0
94
14
0
0
85
0.61
185942--185981
19
2.1
19
86
9
55
37
15
17
30
1.90
186841--186899
12
4.6
13
79
12
61
0
22
0
77
0.76
186846--186902
15
3.8
16
76
19
61
0
24
0
75
0.80
186840--186902
19
3.1
22
82
13
73
0
23
0
76
0.79
186804--186897
29
3.2
28
78
16
102
2
24
0
73
0.94
189311--189347
15
2.3
17
86
9
51
16
13
0
70
1.17
189388--189425
15
2.6
15
87
4
51
44
0
18
36
1.50
192066--192133
33
2.1
32
88
2
100
33
11
16
38
1.85
198648--198717
20
3.6
19
77
9
70
38
17
14
30
1.89
198688--198876
53
3.6
53
97
0
351
36
18
16
28
1.93
198793--198876
19
4.6
19
65
21
63
36
19
15
28
1.92
198918--198973
21
2.6
22
94
5
105
26
25
10
37
1.88
199526--199592
37
1.9
35
88
11
102
32
11
25
29
1.92
200864--200914
20
2.5
20
96
0
93
23
17
7
50
1.72
201656--201712
19
2.9
19
81
2
69
33
14
15
36
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
207751--207795
21
2.1
21
84
8
56
53
4
20
22
1.63
209598--209628
15
2.1
15
93
0
53
48
16
22
12
1.80
211641--211719
20
3.7
21
73
15
63
27
13
13
44
1.83
211706--211744
13
3.0
13
92
0
60
33
17
12
35
1.88
211865--211911
21
2.3
21
79
20
55
34
19
4
42
1.70
211867--211909
20
2.2
19
84
16
52
32
18
4
44
1.71
214298--214323
13
2.0
13
100
0
52
38
15
15
30
1.88

Tables:   1   2

The End!