Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold486
Parameters: 2 7 7 80 10 50 1000
Length:  208893

Tables:   1   2   

This is table  2  of  2  ( 155 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151556--151622
20
3.4
21
76
13
63
32
2
1
62
1.19
153855--153897
2
21.5
2
100
0
86
51
0
0
48
1.00
153948--153981
15
2.2
16
89
5
52
50
0
0
50
1.00
156908--157107
50
4.0
50
80
1
231
33
15
20
30
1.94
158529--158561
15
2.1
16
88
5
50
60
0
0
39
0.97
159125--159211
15
5.9
15
75
6
70
52
1
2
43
1.21
159132--159211
12
6.3
12
73
13
56
52
1
2
43
1.22
159132--159179
22
2.1
23
84
3
62
56
0
2
41
1.11
159117--159210
37
2.6
36
72
12
86
52
1
3
43
1.24
160577--160613
18
2.0
19
89
5
58
37
0
0
62
0.96
160614--160653
16
2.4
16
87
4
53
55
0
0
45
0.99
162219--162247
2
14.5
2
100
0
58
48
0
0
51
1.00
162984--163022
4
9.5
4
83
5
51
30
0
2
66
1.05
162975--163022
17
3.4
14
79
20
55
31
0
2
66
1.03
170413--170447
5
7.0
5
100
0
70
80
0
0
20
0.72
170437--170496
22
2.8
22
75
12
61
60
0
3
36
1.14
170667--170736
33
2.1
33
86
5
97
44
7
2
45
1.46
170856--170884
2
14.5
2
100
0
58
48
0
0
51
1.00
171493--171643
75
2.0
74
87
1
212
39
19
8
33
1.82
177102--177156
26
2.1
26
83
10
67
54
5
1
38
1.34
177947--177990
10
4.1
10
80
13
52
45
0
2
52
1.13
183476--183519
10
4.1
10
80
13
52
45
0
2
52
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
191857--191909
11
4.3
13
74
16
51
64
0
0
35
0.94
192071--192103
11
3.1
11
91
4
50
69
0
0
30
0.88
192138--192183
23
1.9
25
86
8
69
65
2
0
32
1.05
192424--192473
11
4.7
11
78
16
52
60
0
0
40
0.97
192454--192539
31
2.8
30
73
15
86
48
0
0
51
1.00
195496--195531
1
36.0
1
100
0
72
100
0
0
0
0.00
195456--195578
59
2.1
59
98
0
237
71
1
12
14
1.22
200789--200828
21
1.9
21
84
0
53
27
0
25
47
1.52
202774--202819
24
1.9
24
90
0
74
32
17
19
30
1.95
203914--203948
18
2.0
18
88
5
54
48
5
2
42
1.41
204445--204478
14
2.3
15
85
10
52
29
0
2
67
1.05
204470--204527
30
1.9
31
82
3
73
39
1
3
55
1.27
205232--205270
19
2.2
17
86
9
51
38
2
0
58
1.12

Tables:   1   2

The End!