Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold556
Parameters: 2 7 7 80 10 50 1000
Length:  29125

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1624--1799
20
8.4
20
72
17
92
39
14
15
30
1.88
1734--1787
20
2.8
20
97
2
101
33
18
11
37
1.86
2498--2658
47
3.5
46
84
7
184
34
18
26
20
1.96
2808--4926
56
37.5
56
82
6
2325
24
16
28
30
1.97
2808--4926
84
25.0
84
82
6
2397
24
16
28
30
1.97
2808--4710
28
67.8
28
83
5
2168
23
16
28
30
1.96
4626--4805
95
1.9
95
85
4
247
22
18
28
30
1.97
4717--4926
28
7.5
28
84
3
253
26
17
24
31
1.97
10090--10142
22
2.4
21
78
6
52
35
7
16
39
1.78
13758--13973
20
9.7
20
70
20
135
42
11
15
30
1.82
13758--13934
51
3.7
48
74
16
181
43
10
15
30
1.80
13758--13984
91
2.5
91
92
1
366
42
11
15
29
1.82
14666--14878
46
4.5
48
88
2
256
34
18
26
20
1.96
14784--14853
21
3.1
22
69
15
70
32
15
28
22
1.95
14762--14835
25
3.1
25
67
15
75
32
18
27
21
1.97
14666--14844
95
1.9
96
86
2
261
34
17
27
20
1.95
14777--14850
24
3.2
24
68
14
73
35
16
28
20
1.94
14992--19221
28
151.0
28
79
8
3545
24
16
27
30
1.97
14992--20095
56
90.8
56
79
8
4945
24
16
27
30
1.97
14992--20072
84
60.2
84
80
9
4668
24
16
27
30
1.97
18752--18829
39
2.0
39
92
0
129
23
21
28
26
1.99
19183--19260
39
2.0
39
92
0
129
23
21
28
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19222--20118
28
31.8
29
78
9
808
23
17
29
30
1.97
19611--19688
39
2.0
39
92
0
129
23
21
28
26
1.99
19661--20179
28
18.6
28
84
6
187
23
16
30
29
1.96

Tables:   1

The End!