Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold582
Parameters: 2 7 7 80 10 50 1000
Length:  178803

Tables:   1   2   

This is table  2  of  2  ( 143 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
158932--159750
122
6.4
128
76
15
488
31
14
34
19
1.92
159166--159339
88
2.0
88
83
6
219
28
16
32
23
1.96
159415--159659
61
4.0
61
92
0
400
30
14
35
19
1.91
159450--159625
27
6.0
27
73
19
138
28
14
36
20
1.92
159511--159716
95
2.2
89
85
9
245
30
14
34
20
1.92
159626--159781
63
2.5
63
82
5
172
33
13
30
21
1.92
159532--159783
95
2.7
95
83
6
228
33
13
32
20
1.92
160760--160826
26
2.5
26
82
15
84
0
8
7
83
0.81
160765--160827
23
2.6
24
76
14
67
0
6
9
84
0.79
161066--161104
19
2.1
19
85
0
51
2
2
7
87
0.73
168008--168132
52
2.4
52
97
0
232
28
18
18
35
1.94
168008--168153
52
2.8
51
90
4
222
29
17
18
34
1.94
168162--168186
13
1.9
13
100
0
50
32
16
16
36
1.90
169285--169318
18
1.9
18
88
5
52
32
11
5
50
1.63
170185--170238
22
2.5
21
77
11
56
66
0
0
33
0.92
170617--170653
19
1.9
19
89
10
58
59
0
0
40
0.97
171927--172018
21
4.5
19
72
22
62
1
18
1
79
0.86
171926--172055
6
21.2
6
70
14
70
2
20
1
76
0.98
171926--172020
31
3.1
31
78
15
92
1
18
1
78
0.86
171932--172015
26
3.2
26
77
9
82
1
19
1
78
0.88
171973--172055
34
2.5
30
75
21
76
2
19
2
75
1.02
171926--172084
11
14.9
11
69
21
65
3
21
1
73
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
176303--176396
46
2.0
46
87
0
134
37
5
26
30
1.79

Tables:   1   2

The End!