Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold610
Parameters: 2 7 7 80 10 50 1000
Length:  40637

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
622--654
17
2.0
17
88
5
50
54
12
27
6
1.60
5014--5092
20
3.7
21
75
15
72
26
13
15
44
1.84
5079--5117
13
3.0
13
96
0
69
30
17
15
35
1.91
7528--7600
20
3.6
20
81
3
101
35
13
19
31
1.91
7546--7621
21
3.7
21
80
3
100
42
11
17
28
1.84
7528--7621
41
2.3
41
98
0
179
39
12
18
29
1.88
7660--7685
13
2.0
13
100
0
52
38
15
15
30
1.88
9243--9296
20
2.6
22
82
14
78
33
18
12
35
1.89
9243--9315
21
3.5
20
85
10
78
34
17
12
35
1.88
10997--11048
20
2.7
20
87
3
70
30
11
21
36
1.89
11167--11218
21
2.4
22
90
6
88
28
21
11
38
1.88
13302--13437
72
1.9
72
81
6
168
55
5
13
25
1.58
16944--17072
52
2.5
52
93
0
213
31
17
16
35
1.92
16944--17092
52
2.9
52
83
4
201
32
16
16
34
1.91
17081--17105
13
1.9
13
100
0
50
36
16
16
32
1.90
17146--17212
33
2.0
33
88
0
98
40
14
11
32
1.83
17168--17192
13
1.9
13
100
0
50
32
16
16
36
1.90
18554--18578
13
1.9
13
100
0
50
36
16
16
32
1.90
20267--20320
20
2.7
20
80
8
65
38
16
14
29
1.89
20308--20390
19
4.6
19
66
22
70
38
16
15
28
1.90
20308--20443
53
2.6
53
93
0
227
36
16
16
29
1.92
20467--20519
22
2.5
20
81
6
61
24
22
9
43
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21071--21137
37
1.9
35
85
11
93
29
11
28
29
1.92
23080--23117
13
2.9
13
88
11
60
34
21
15
28
1.94
29210--29259
24
2.1
24
85
7
66
30
4
6
60
1.39
30766--30812
21
2.2
21
85
7
60
46
23
23
6
1.75
36010--36065
10
5.6
10
81
8
69
85
3
8
1
0.78
36010--36062
9
5.6
9
81
18
54
86
3
7
1
0.75

Tables:   1

The End!