Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold701
Parameters: 2 7 7 80 10 50 1000
Length:  21520

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
114--163
19
2.5
20
87
6
75
38
16
16
30
1.90
538--609
32
2.4
30
80
17
78
31
4
9
54
1.52
793--825
15
2.1
16
88
5
50
48
6
9
36
1.60
894--1011
21
5.8
20
72
12
78
33
8
7
50
1.61
895--969
21
3.6
21
78
1
80
37
6
5
50
1.51
938--978
19
2.1
20
86
4
57
34
9
4
51
1.56
1033--1110
21
3.7
21
76
6
68
30
7
14
47
1.72
1072--1116
21
2.1
21
83
0
54
26
8
11
53
1.65
1163--1325
41
4.0
40
78
12
152
36
5
9
48
1.58
1166--1516
42
8.4
42
70
14
154
33
7
10
48
1.65
1243--1366
11
11.6
11
66
13
71
35
5
10
48
1.61
1166--1372
64
3.3
63
76
12
162
35
6
10
47
1.64
1166--1449
21
13.6
21
72
10
188
34
6
10
49
1.62
1657--1724
21
3.2
20
74
15
57
36
7
11
44
1.69
1736--1880
21
6.9
21
72
15
120
35
4
8
51
1.53
1734--1898
84
2.0
85
81
6
201
34
6
9
50
1.59
1780--1912
21
6.3
20
68
12
61
36
4
8
51
1.52
1975--2033
22
2.9
21
80
9
59
33
10
10
45
1.72
2020--2062
20
2.2
20
86
0
59
34
11
9
44
1.73
2720--2760
3
14.0
3
85
14
59
63
2
34
0
1.08
2706--2760
15
3.5
15
85
14
67
60
1
36
1
1.18
2828--2860
15
2.2
15
94
0
57
75
0
6
18
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3732--3798
37
1.9
35
88
11
102
29
25
11
32
1.92
4239--4295
20
2.8
21
78
5
73
26
15
17
40
1.90
7068--7232
84
2.0
84
82
7
201
24
19
3
52
1.62
8754--8820
37
1.9
35
88
11
102
29
25
11
32
1.92
9161--9199
19
2.1
19
95
0
69
30
10
15
43
1.80
9252--9277
13
2.0
13
100
0
52
30
15
15
38
1.88
16223--16248
13
2.0
13
100
0
52
38
15
15
30
1.88
16302--16382
19
4.5
19
75
20
75
33
17
12
37
1.87
16287--16362
32
2.4
32
93
0
125
35
17
13
34
1.88
17139--17700
49
11.7
49
78
6
506
31
17
25
25
1.97
17139--17690
92
5.7
98
85
3
655
31
17
25
25
1.97
17741--17807
32
2.1
33
91
2
109
20
17
32
28
1.96
17940--18243
27
10.2
27
74
16
153
33
12
32
20
1.91
17925--18277
61
5.8
61
74
15
191
33
12
32
20
1.90
17968--18304
34
10.8
34
78
11
223
34
13
31
20
1.91
17940--18119
88
2.0
89
88
2
265
33
12
33
20
1.90
18309--19159
32
26.9
33
81
7
547
34
14
28
23
1.93
18122--19161
30
33.1
31
78
7
788
34
14
28
22
1.93
18063--19166
191
5.8
189
80
7
1039
34
13
28
22
1.93
20440--20521
1
82.0
1
75
0
74
0
0
12
87
0.53
20440--20519
5
16.8
5
85
12
82
0
0
12
87
0.54
20443--20525
7
11.4
7
82
14
98
0
0
13
86
0.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20440--20525
42
2.0
44
93
6
149
0
0
12
87
0.55
20440--20525
31
2.8
30
87
7
120
0
0
12
87
0.55

Tables:   1

The End!