Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold732
Parameters: 2 7 7 80 10 50 1000
Length:  61618

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5663--5963
150
2.0
152
95
1
543
45
16
15
22
1.85
11418--11455
20
1.9
20
100
0
76
47
10
10
31
1.72
16955--16990
2
18.0
2
94
0
63
47
2
0
50
1.15
18189--18214
13
2.0
13
100
0
52
38
15
15
30
1.88
20421--20465
21
2.1
22
88
8
67
55
4
17
22
1.60
22269--22299
15
2.1
15
93
0
53
48
16
22
12
1.80
24369--24405
13
2.8
13
100
0
74
29
13
16
40
1.86
24531--24576
21
2.2
20
81
11
58
32
19
4
43
1.71
26191--26240
23
2.2
23
100
0
100
40
4
28
28
1.74
26980--27031
19
2.7
20
84
6
70
40
17
13
28
1.87
28516--28551
18
2.0
18
88
0
54
55
0
0
44
0.99
31923--31962
21
1.9
21
84
0
53
12
5
7
75
1.18
37138--37181
21
2.1
21
83
8
54
50
0
9
40
1.34
37180--37214
17
2.0
18
88
5
54
40
17
11
31
1.85
38004--38055
17
3.1
15
81
13
50
59
3
3
32
1.33
38238--38273
13
2.8
12
88
12
54
66
0
2
30
1.06
38234--38336
53
2.0
51
81
12
120
58
0
0
40
1.05
38269--38356
25
3.4
25
79
16
99
55
0
0
44
0.99
38269--38356
26
3.4
24
80
13
86
55
0
0
44
0.99
38289--38366
26
2.9
27
75
19
74
56
0
0
43
0.99
38610--38660
24
2.1
25
85
3
68
41
1
0
56
1.10
38648--38691
12
3.5
12
84
9
61
34
0
0
65
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39210--39244
11
3.1
11
91
4
52
62
0
0
37
0.95
41327--41361
18
1.9
18
94
0
61
37
0
62
0
0.95
46463--46504
22
1.9
22
85
0
57
66
0
0
33
0.92
47716--47754
20
2.0
20
94
0
69
41
5
0
53
1.23
53403--53453
20
2.3
23
83
12
63
29
15
9
45
1.79
53467--53521
20
2.8
20
80
0
65
34
9
12
43
1.74
58739--58769
15
2.1
15
93
0
53
48
16
22
12
1.80

Tables:   1

The End!