Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold798
Parameters: 2 7 7 80 10 50 1000
Length:  93289

Tables:   1   2   

This is table  2  of  2  ( 142 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80817--80856
19
2.1
19
86
9
55
42
0
0
57
0.98
80847--80886
18
2.2
18
100
0
80
52
0
0
47
1.00
80853--80908
18
2.8
22
87
12
77
51
0
0
48
1.00
82094--82139
23
2.0
24
87
8
69
65
4
0
30
1.12
82233--82274
21
2.0
21
85
0
57
45
4
7
42
1.52
82630--82794
86
1.9
86
80
2
188
47
8
6
37
1.59
82926--83008
37
2.2
40
87
8
120
65
3
4
26
1.30
83080--83139
15
4.1
14
81
8
75
0
21
1
76
0.87
83627--83690
12
5.2
12
73
14
58
40
0
0
59
0.97
83628--83677
22
2.2
22
82
3
55
40
0
0
60
0.97
83818--83924
53
2.0
53
98
0
205
37
10
7
44
1.67
84570--84656
16
5.2
16
69
15
52
52
1
1
44
1.15
85525--85603
27
3.1
27
77
18
96
46
1
3
48
1.28
85575--85677
35
3.0
36
80
10
103
48
1
3
45
1.32
85523--85661
12
11.8
12
69
19
96
48
1
3
46
1.28
85617--85663
20
2.3
20
89
7
69
53
2
2
42
1.25
85549--85725
12
14.5
13
70
19
77
48
1
3
46
1.26
85597--85757
82
2.0
81
82
10
195
48
1
2
47
1.26
85695--85776
19
4.3
19
75
7
76
50
1
1
47
1.16
85751--85818
30
2.2
30
81
2
73
47
1
5
45
1.36
86468--86506
18
2.2
18
85
0
51
46
5
0
48
1.24
87878--87913
19
1.9
19
88
5
56
36
5
0
58
1.22

Tables:   1   2

The End!