Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold817
Parameters: 2 7 7 80 10 50 1000
Length:  12664

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
681--725
22
2.1
21
84
8
56
22
15
6
55
1.63
670--725
21
2.7
21
75
13
62
23
14
7
55
1.63
2951--2976
13
2.0
13
100
0
52
30
15
15
38
1.88
4889--6036
386
3.0
386
99
0
2237
29
19
16
34
1.94
6563--6848
79
3.6
79
80
7
328
27
26
12
33
1.92
6782--6897
51
2.3
51
88
4
171
31
29
8
31
1.87
6705--6977
130
2.1
130
86
0
366
29
26
10
33
1.90
6646--7040
209
1.9
209
79
4
447
29
25
10
34
1.89
6832--7073
79
3.0
80
79
7
269
30
24
11
33
1.91
8944--8974
15
2.1
15
100
0
62
45
0
35
19
1.51
8949--8982
15
2.3
15
89
0
50
55
0
29
14
1.40
12086--12153
22
3.1
22
77
8
75
39
7
14
38
1.74
12211--12664
52
8.8
52
75
12
391
38
3
6
51
1.43
12361--12519
47
3.3
46
72
14
140
42
3
5
49
1.40

Tables:   1

The End!