Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold849
Parameters: 2 7 7 80 10 50 1000
Length:  27668

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7808--7927
52
2.3
52
92
2
197
30
17
17
35
1.93
7803--7947
51
2.8
51
85
6
186
30
17
17
34
1.93
7936--7960
13
1.9
13
100
0
50
36
16
16
32
1.90
7864--8047
87
2.2
84
82
8
212
34
14
16
34
1.90
8023--8047
13
1.9
13
100
0
50
32
16
16
36
1.90
8894--9102
52
4.1
53
74
13
163
32
16
25
25
1.96
8997--9087
43
2.1
44
89
2
139
29
17
25
27
1.97
9123--9263
30
4.9
29
84
8
180
20
17
29
31
1.96
9300--9387
30
3.0
30
83
3
106
23
17
34
25
1.96
9089--9387
59
5.0
59
71
12
216
24
16
30
28
1.96
10828--10925
1
98.0
1
77
0
70
2
4
8
85
0.79
10828--10925
27
3.6
25
78
18
108
2
4
8
85
0.79
10832--10921
45
2.0
47
89
8
141
2
4
8
84
0.84
10829--10923
16
5.9
16
76
13
79
2
4
8
85
0.81
20639--20665
10
2.7
10
100
0
54
77
22
0
0
0.76
24804--24927
52
2.4
51
94
1
212
28
17
18
35
1.94
24804--24947
52
2.8
51
88
5
202
29
17
18
34
1.94
24936--24960
13
1.9
13
100
0
50
36
16
16
32
1.90
25001--25067
33
2.0
33
88
0
98
40
13
11
34
1.81
25023--25047
13
1.9
13
100
0
50
32
16
16
36
1.90
26292--26641
118
3.0
117
87
1
468
29
18
17
34
1.94
27499--27585
24
3.6
24
76
0
84
29
19
22
27
1.98

Tables:   1

The End!