Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold886
Parameters: 2 7 7 80 10 50 1000
Length:  43206

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--19579
655
29.9
656
88
2
26736
28
23
17
30
1.97
1--19579
328
59.7
328
87
2
26595
28
23
17
30
1.97
19981--20006
13
2.0
13
100
0
52
38
15
15
30
1.88
19963--20027
34
2.0
32
87
6
94
41
18
13
26
1.88
22237--22292
21
2.6
22
75
13
64
55
7
14
23
1.63
22211--22281
21
3.4
20
73
21
58
53
5
16
23
1.64
22211--22292
43
1.9
43
83
11
107
53
6
15
24
1.65
26195--26233
13
3.0
13
96
0
69
30
15
20
33
1.94
26353--26399
21
2.3
20
78
10
51
34
19
2
44
1.62
28802--28827
13
2.0
13
100
0
52
38
15
15
30
1.88
28784--28848
34
2.0
32
87
6
94
41
18
13
26
1.88
29599--39599
327
30.5
328
89
2
14618
28
23
17
29
1.97
39403--39429
12
2.2
12
100
0
54
11
40
11
37
1.76
39624--42512
974
3.0
968
89
5
4272
27
24
17
30
1.98
39624--42512
323
9.0
325
86
6
3757
27
24
17
30
1.98
42268--42774
262
1.9
266
89
5
805
28
24
15
31
1.95
42516--43205
321
2.1
321
88
5
1022
28
24
16
30
1.96

Tables:   1

The End!