Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold997
Parameters: 2 7 7 80 10 50 1000
Length:  27379

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1240--1314
1
75.0
1
97
0
141
98
0
1
0
0.10
4787--4951
20
7.7
20
76
14
159
40
13
15
30
1.85
4787--4951
40
3.8
40
78
16
195
40
13
15
30
1.85
4787--4962
91
1.9
91
97
0
334
40
13
15
30
1.85
5650--5861
48
4.5
48
91
1
272
33
18
26
20
1.96
5744--5818
25
3.2
24
66
14
66
32
18
28
21
1.97
5760--5833
24
3.2
23
66
14
62
35
16
28
20
1.94
5767--5836
21
3.1
22
69
15
70
32
15
28
22
1.95
5640--5866
94
2.4
92
82
5
267
33
18
27
20
1.96
5975--13041
56
124.8
56
80
6
6461
24
16
27
30
1.97
5975--12906
84
81.6
84
81
6
7052
24
16
27
30
1.97
5975--9769
28
134.6
28
81
5
3878
25
16
26
31
1.97
9742--9819
39
2.0
39
92
0
129
23
21
28
26
1.99
9781--12923
28
110.8
29
77
9
2584
24
16
27
31
1.97
9714--9847
67
2.0
67
88
5
200
23
18
29
29
1.98
11553--11630
39
2.0
39
92
0
129
23
21
28
26
1.99
11985--12062
39
2.0
39
89
0
120
21
24
28
25
1.99
12416--12493
39
2.0
39
92
0
129
23
21
28
26
1.99
12550--13014
28
16.6
28
81
7
140
23
16
29
30
1.96
12933--13011
27
2.9
27
90
1
113
25
13
30
30
1.94
25401--25459
21
2.7
22
75
10
59
50
6
1
40
1.39

Tables:   1

The End!