Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010112.1 Corchorus capsularis cultivar CVL-1 contig10133, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16593

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--581
48
12.2
48
82
4
581
20
49
4
25
1.68
1--581
144
4.1
144
84
2
658
20
49
4
25
1.68
1099--1997
288
3.1
284
85
5
1194
41
10
15
32
1.81
2147--2189
15
2.8
15
82
3
50
46
9
9
34
1.68
4982--5010
6
4.8
6
100
0
58
17
0
31
51
1.45
14669--14731
32
1.9
32
87
3
90
31
23
19
25
1.98
15144--15626
220
2.2
219
93
1
806
19
28
25
26
1.99
15768--15852
28
3.4
25
76
17
79
7
48
10
34
1.65
15872--15907
17
2.1
17
89
0
54
0
33
0
66
0.92
15919--16003
28
3.4
25
77
17
88
7
48
10
34
1.65
16023--16058
6
6.2
6
87
6
56
0
36
0
63
0.94
15761--16071
151
2.1
151
97
0
586
9
39
9
41
1.70
16023--16058
17
2.1
17
94
0
63
0
36
0
63
0.94

Tables:   1

The End!