Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010179.1 Corchorus capsularis cultivar CVL-1 contig10200, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17450

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
2
16.5
2
100
0
66
51
0
0
48
1.00
5246--5307
13
5.0
13
72
7
58
66
6
8
19
1.40
5244--5307
24
2.6
25
73
9
69
67
6
7
18
1.38
11576--11697
43
2.8
43
92
0
208
39
6
16
37
1.75
11606--11728
35
3.3
35
76
16
120
37
5
18
38
1.75
11666--11739
35
2.1
35
92
0
121
37
4
17
40
1.69
11678--11795
56
2.1
56
87
0
164
39
4
16
38
1.69
11649--11869
91
2.4
91
96
0
415
37
6
18
37
1.76
11734--11830
35
2.8
35
87
0
122
39
5
17
38
1.72
12160--12242
43
1.9
43
90
0
130
40
9
18
31
1.82

Tables:   1

The End!