Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010282.1 Corchorus capsularis cultivar CVL-1 contig10303, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23455

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51--130
32
2.5
32
83
4
90
33
32
25
8
1.86
264--342
22
3.7
21
76
8
70
18
40
34
6
1.76
1002--1041
19
2.1
19
95
0
71
40
22
17
20
1.92
1057--1139
25
3.2
25
68
6
76
26
33
28
10
1.90
1057--1158
52
1.9
53
94
2
179
25
33
30
10
1.90
1744--2352
32
19.2
32
78
7
602
29
31
29
10
1.90
2081--2161
37
2.2
37
90
0
126
28
28
33
9
1.89
2382--2520
32
4.4
31
83
1
134
29
30
28
12
1.93
2226--2625
186
2.2
184
83
5
502
30
29
26
13
1.93
2484--2655
91
1.9
91
87
2
256
30
30
22
15
1.95
2661--2763
31
3.3
30
85
5
134
31
29
28
11
1.92
2412--2952
246
2.2
247
89
1
807
31
29
25
13
1.94
2716--2953
94
2.6
91
84
4
309
31
28
26
13
1.94
7928--8015
45
2.0
45
93
0
149
29
28
12
29
1.93
10503--10588
43
2.0
43
93
0
145
20
15
13
50
1.78
18176--18201
6
4.3
6
100
0
52
15
19
46
19
1.85

Tables:   1

The End!