Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010363.1 Corchorus capsularis cultivar CVL-1 contig10384, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39173

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20834--20889
28
2.0
28
100
0
112
32
10
32
25
1.90
23035--23108
31
2.4
31
86
0
94
35
22
13
28
1.92
31146--34134
333
9.0
333
85
5
3785
33
14
15
37
1.87
30656--34134
665
5.3
664
83
5
4088
33
14
15
37
1.87
34885--34909
11
2.3
11
100
0
50
40
8
8
44
1.63
34599--35820
335
3.7
329
86
4
1419
32
13
16
37
1.87
34599--37236
332
7.7
332
71
14
1550
32
13
15
37
1.87
35681--35951
140
2.0
137
85
2
371
36
13
14
36
1.85
35954--37236
332
3.9
330
86
5
1755
32
14
15
38
1.87
37096--37367
140
2.0
138
85
1
373
35
12
15
36
1.86
37370--38675
334
3.9
332
89
3
1899
32
14
15
37
1.87
37378--38675
667
1.9
670
88
3
1974
32
14
14
37
1.87

Tables:   1

The End!