Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010366.1 Corchorus capsularis cultivar CVL-1 contig10387, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13197

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
318--347
3
10.0
3
100
0
60
0
33
0
66
0.92
346--386
3
14.0
3
94
5
75
34
0
0
65
0.93
3415--3444
2
15.5
2
93
6
53
50
0
0
50
1.00
9879--9919
21
1.9
22
85
5
57
34
0
2
63
1.08
9984--10033
26
1.9
26
91
0
82
20
6
14
60
1.55
10195--12249
651
3.1
650
85
5
2625
34
15
16
33
1.90
10115--12249
975
2.2
982
84
5
2773
34
15
16
34
1.90

Tables:   1

The End!