Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010536.1 Corchorus capsularis cultivar CVL-1 contig10557, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7447

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2250
322
7.0
320
86
3
2969
35
17
14
31
1.91
1--2248
643
3.5
641
86
3
2948
35
17
14
31
1.91
1--2250
965
2.3
956
85
4
3058
35
17
14
31
1.91
2251--3040
325
2.5
321
79
6
828
34
17
14
33
1.90
3587--3626
19
2.1
19
85
0
53
35
17
15
32
1.91
3644--3890
132
1.9
132
82
1
316
40
13
17
29
1.87
4553--4604
15
3.5
15
80
17
56
51
1
1
44
1.23
5799--5982
53
3.5
53
93
0
323
35
27
30
5
1.81
5960--6057
24
4.0
24
73
12
92
51
26
17
5
1.66

Tables:   1

The End!