Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010659.1 Corchorus capsularis cultivar CVL-1 contig10680, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31386

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2202--2234
17
2.0
17
88
5
50
21
0
0
78
0.75
4833--4985
33
4.7
33
86
3
195
31
9
17
41
1.82
9488--9551
33
1.9
33
83
0
83
28
12
17
42
1.85
9566--9718
33
4.7
33
86
3
195
31
9
17
41
1.82
14234--14273
19
2.1
19
100
0
80
30
15
10
45
1.78
19160--19193
15
2.3
15
100
0
68
32
35
5
26
1.81
22765--22812
18
2.6
18
90
3
69
31
10
8
50
1.66
22922--22954
17
1.9
17
88
11
50
42
15
15
27
1.86
27422--27465
22
2.0
22
95
0
79
9
20
13
56
1.64
27591--27617
13
2.1
13
100
0
54
14
22
7
55
1.64
30468--30690
35
6.3
35
87
5
324
39
8
16
34
1.80
30467--31358
143
6.2
141
82
9
934
39
9
17
34
1.81
30674--31358
35
19.4
35
85
4
865
38
8
17
34
1.81
30996--31040
8
5.2
8
80
15
54
44
2
13
40
1.56
31343--31369
14
1.9
14
100
0
54
40
0
29
29
1.57

Tables:   1

The End!