Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010705.1 Corchorus capsularis cultivar CVL-1 contig10726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18393

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1189--1675
65
7.5
65
86
4
542
42
14
19
22
1.88
2555--2629
34
2.2
34
92
2
123
14
20
12
53
1.72
9792--10200
35
11.9
34
85
6
413
33
17
8
40
1.81
9954--10082
8
15.0
8
72
13
96
35
14
5
44
1.69
9792--10193
105
3.9
105
84
6
468
33
17
8
39
1.81
10105--10163
27
2.2
27
100
0
118
33
15
10
40
1.81
10070--10193
62
2.0
62
95
0
221
32
17
11
38
1.85
17390--17424
17
2.0
18
88
5
54
2
20
0
77
0.90
17374--17427
23
2.3
23
84
9
65
5
18
0
75
0.98

Tables:   1

The End!