Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010899.1 Corchorus capsularis cultivar CVL-1 contig10920, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9164

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1858--5739
332
11.8
331
84
3
4730
36
15
14
32
1.89
1858--5739
663
5.9
661
85
4
4661
36
15
14
32
1.89
5468--6019
274
2.0
275
91
0
890
36
16
14
32
1.90
5144--6351
606
2.0
606
85
2
1633
36
16
14
32
1.90
5750--7131
332
4.1
331
83
4
1602
36
15
14
33
1.88
4812--6676
937
2.0
938
89
2
2877
36
16
14
32
1.89
6769--7490
360
2.0
364
86
4
1021
36
14
15
33
1.88
7893--7931
18
2.2
18
95
0
69
23
33
7
35
1.83
8029--8115
45
1.9
46
95
2
158
32
18
24
25
1.97

Tables:   1

The End!