Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011128.1 Corchorus capsularis cultivar CVL-1 contig11149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25123

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--29
1
29.0
1
100
0
58
0
0
0
100
0.00
468--516
14
3.2
15
78
21
57
44
8
0
46
1.33
474--498
2
12.5
2
100
0
50
48
0
0
52
1.00
482--525
21
2.1
21
87
8
63
43
6
0
50
1.29
3459--3541
33
2.5
33
86
7
107
7
27
43
21
1.79
3492--3575
43
2.0
43
87
0
123
7
28
40
23
1.81
3525--3552
10
2.8
10
100
0
56
0
21
50
28
1.49
7257--7950
331
2.1
329
83
4
862
37
15
15
31
1.89
8366--9188
306
2.6
305
79
7
747
36
14
15
33
1.88
8672--9479
335
2.4
332
83
3
971
37
14
13
34
1.86
9875--10141
78
3.4
77
89
3
383
27
23
17
31
1.97
22442--22582
62
2.3
62
83
0
183
17
24
26
31
1.97
22485--22582
31
3.2
31
88
0
142
15
23
28
32
1.95

Tables:   1

The End!