Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011135.1 Corchorus capsularis cultivar CVL-1 contig11156, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29819

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--27
2
12.5
2
100
0
50
52
0
0
48
1.00
6713--6744
16
2.0
16
93
0
55
31
28
6
34
1.82
8551--8578
5
5.6
5
100
0
56
57
0
0
42
0.99
10081--10129
23
2.1
23
100
0
98
32
10
24
32
1.89
10042--10168
62
2.0
62
98
0
245
33
12
20
33
1.90
12306--14497
662
3.3
650
76
9
1764
37
15
13
33
1.87
12306--14532
336
6.7
326
77
7
1724
37
15
14
33
1.88
14006--15116
594
1.9
592
79
4
1250
35
14
14
35
1.87
14867--16640
980
1.8
969
81
6
2231
36
14
14
34
1.87
21342--21413
28
2.6
27
77
16
69
55
6
9
27
1.58
22023--22054
2
16.0
2
100
0
64
50
0
0
50
1.00
23112--23153
22
1.9
22
100
0
84
33
11
9
45
1.73
27351--27604
134
1.9
134
99
0
499
41
10
8
38
1.71

Tables:   1

The End!