Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011352.1 Corchorus capsularis cultivar CVL-1 contig11373, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14113

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1838--2337
35
14.7
35
80
9
437
38
9
17
34
1.83
1838--2337
70
7.3
70
81
6
505
38
9
17
34
1.83
1837--2337
136
3.7
136
81
5
554
37
9
17
34
1.83
5518--5571
25
2.2
25
86
0
72
38
5
11
44
1.63
6241--6286
16
2.9
16
81
15
51
73
0
26
0
0.83
7826--7940
35
3.3
35
70
11
108
17
15
27
39
1.90
7877--8002
36
3.5
35
74
8
119
18
15
28
38
1.91
7783--7989
71
2.9
70
81
6
247
16
16
27
38
1.91
11736--12511
35
22.7
35
82
9
667
36
9
19
33
1.85
11735--12511
101
7.5
102
81
9
734
36
10
19
33
1.85

Tables:   1

The End!