Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011363.1 Corchorus capsularis cultivar CVL-1 contig11384, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13896

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
583--614
2
17.0
2
87
12
50
53
0
0
46
1.00
3466--5126
37
45.2
37
84
5
1834
45
9
18
26
1.79
4145--4239
35
2.8
33
98
1
154
43
14
17
24
1.87
3466--4928
587
2.5
586
87
4
2052
46
9
19
25
1.79
5122--5570
41
11.0
41
89
3
606
46
9
20
23
1.79
5885--5915
16
1.9
16
93
0
53
3
12
0
83
0.75
5885--5937
20
2.6
21
79
8
65
3
20
0
75
0.96
5914--5979
34
2.0
33
93
3
114
6
33
1
59
1.31
11668--11717
25
2.0
25
96
0
91
32
14
20
34
1.92
11872--11914
16
2.9
15
86
10
54
32
0
0
67
0.91
12324--12348
13
1.9
13
100
0
50
72
16
0
12
1.13
13719--13760
20
2.1
20
86
0
57
64
16
4
14
1.45

Tables:   1

The End!