Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011406.1 Corchorus capsularis cultivar CVL-1 contig11427, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6026

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
531--637
47
2.3
47
91
0
169
32
19
24
23
1.97
579--2019
331
4.4
330
78
6
1499
37
15
15
31
1.88
2552--2653
47
2.2
47
92
3
170
37
17
22
22
1.94
2599--4166
331
4.7
332
80
4
1707
37
14
15
32
1.88
578--5566
663
7.4
661
71
12
3358
37
15
14
32
1.88
4418--5421
366
2.7
366
89
3
1466
37
15
14
33
1.87
5584--5621
20
1.9
20
88
0
58
18
18
23
39
1.92
5724--5771
17
2.8
17
87
0
60
20
20
25
33
1.97

Tables:   1

The End!