Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011444.1 Corchorus capsularis cultivar CVL-1 contig11465, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42852

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11169--11194
6
4.3
6
100
0
52
15
0
0
84
0.62
14890--15024
45
3.0
44
92
4
209
36
17
7
38
1.78
15581--15612
16
2.0
16
93
0
55
34
12
15
37
1.85
23229--23270
19
2.4
17
85
14
59
35
21
4
38
1.75
23235--23273
19
2.1
19
100
0
78
30
25
5
38
1.78
23819--23857
20
2.0
20
94
0
69
41
17
10
30
1.83
24045--24072
14
2.0
14
100
0
56
50
14
14
21
1.78
30023--30089
29
2.2
29
84
5
80
38
1
17
41
1.59
30040--30159
29
4.2
29
69
18
90
39
1
13
45
1.53
30054--30164
53
2.1
52
81
8
127
40
1
12
45
1.53
30673--31416
35
22.2
34
75
12
587
38
8
18
34
1.82
30938--31329
126
3.0
126
83
8
500
39
7
16
36
1.78
31158--31211
14
3.6
14
74
13
54
37
9
22
31
1.86
30923--31378
161
2.8
160
78
10
385
38
8
17
35
1.80
31064--31416
135
2.6
135
85
1
411
39
8
18
34
1.81
33634--33710
41
1.9
40
86
7
111
22
15
36
25
1.93
33696--33746
26
1.9
27
88
4
77
19
11
37
31
1.88
38342--38523
91
2.0
91
97
0
346
34
20
20
24
1.97

Tables:   1

The End!