Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011486.1 Corchorus capsularis cultivar CVL-1 contig11507, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20916

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3060--3093
11
3.2
10
84
15
50
29
2
17
50
1.61
10910--11465
22
25.6
22
65
14
86
35
15
9
39
1.80
11082--11167
45
1.9
45
83
4
111
38
16
11
33
1.85
11217--11487
22
12.5
22
69
15
106
36
15
8
39
1.79
11219--11459
128
1.9
126
81
3
286
35
16
8
39
1.79
11609--11714
22
4.8
22
73
9
90
33
16
10
40
1.82
11628--11756
66
2.0
66
81
3
152
34
14
10
40
1.80
11672--11821
22
6.8
22
74
9
117
36
12
10
41
1.76
11879--11978
22
4.5
22
70
18
73
38
17
9
36
1.81
11863--11978
44
2.7
43
75
14
103
37
17
7
37
1.78
12014--12078
22
2.9
22
83
4
76
41
21
6
30
1.77
12021--12174
22
6.9
23
74
12
99
39
17
9
33
1.81
12919--12977
30
1.9
31
93
3
102
49
3
16
30
1.63
17648--18090
167
2.7
166
87
0
625
39
15
14
30
1.88
18188--18263
38
2.0
37
87
7
109
43
7
0
48
1.32
18329--18366
7
5.6
7
84
6
51
36
2
13
47
1.56
18659--18748
45
2.0
45
91
0
144
27
21
17
33
1.96
18947--18978
3
11.0
3
93
6
57
68
0
0
31
0.90

Tables:   1

The End!