Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011698.1 Corchorus capsularis cultivar CVL-1 contig11719, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27227

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1072--1097
13
2.0
13
100
0
52
76
0
23
0
0.78
1434--1477
22
2.0
22
90
0
70
27
0
18
54
1.44
1920--2563
35
18.9
35
83
6
847
39
10
17
33
1.83
1920--2563
101
6.3
104
86
4
816
39
10
17
33
1.83
2297--2356
19
3.3
19
65
13
54
40
11
13
35
1.81
1927--2563
237
2.7
237
93
1
1062
39
10
17
33
1.83
4500--4559
31
2.0
31
90
3
95
50
5
16
28
1.66
4588--4648
2
31.0
2
80
9
72
45
1
4
47
1.34
4662--4733
35
2.1
35
94
0
126
48
15
1
34
1.54
24055--24110
19
2.9
19
76
10
69
25
0
10
64
1.26

Tables:   1

The End!