Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011834.1 Corchorus capsularis cultivar CVL-1 contig11855, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13422

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--72
12
4.4
16
74
22
51
1
27
0
71
0.95
4864--5286
22
19.0
22
70
10
209
38
9
14
38
1.78
4917--5517
66
9.2
65
67
15
220
36
8
16
37
1.80
4917--5517
44
13.7
44
71
11
270
36
8
16
37
1.80
5188--5312
41
3.0
41
78
11
144
39
9
15
36
1.80
5413--5517
22
4.9
22
83
9
135
34
9
19
37
1.84
5803--5856
23
2.4
22
87
3
72
37
9
18
35
1.83
5664--5856
22
8.9
22
64
11
83
34
10
17
37
1.84
5918--5977
22
2.7
23
80
12
72
38
6
26
28
1.81
6068--6351
22
12.9
22
70
6
155
36
13
15
34
1.87
6113--6336
88
2.5
88
75
7
218
35
13
15
34
1.87
6297--6372
22
3.5
22
79
0
80
42
13
13
31
1.82
6936--7203
109
2.5
106
82
4
295
40
14
10
34
1.80

Tables:   1

The End!