Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011973.1 Corchorus capsularis cultivar CVL-1 contig11994, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4924

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1883
335
5.6
333
87
3
2566
35
16
15
31
1.91
1--1883
669
2.8
664
87
3
2618
35
16
15
31
1.91
1596--2173
290
2.0
292
90
2
903
35
17
15
31
1.91
1888--3523
333
4.9
332
87
4
2305
36
17
15
31
1.91
3252--3777
272
1.9
271
87
2
770
35
16
16
30
1.92
3524--4070
292
1.9
292
86
3
796
36
16
15
30
1.90
3782--4924
335
3.4
333
86
3
1560
36
16
14
32
1.89

Tables:   1

The End!