Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012314.1 Corchorus capsularis cultivar CVL-1 contig12335, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22390

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6184--6308
14
8.6
14
71
18
80
44
3
23
29
1.69
6221--6304
22
3.9
21
74
14
73
40
3
22
33
1.71
6271--6308
8
5.0
8
84
12
53
47
0
23
28
1.52
6430--6483
8
7.2
8
76
19
55
50
7
16
25
1.71
6347--6483
22
6.2
22
73
14
120
45
8
21
24
1.78
6458--6597
36
3.7
36
71
10
127
41
3
24
30
1.72
6494--6743
22
11.5
22
75
10
185
44
6
21
28
1.75
6560--6714
14
10.8
14
70
20
81
47
6
20
26
1.74
6572--6714
30
4.9
30
72
19
122
47
6
18
26
1.74
6572--6715
8
18.8
8
70
18
65
47
6
19
26
1.74
6828--6867
16
2.4
17
87
8
55
40
5
25
30
1.77
6721--6863
58
2.5
59
84
2
182
42
11
23
22
1.86
6837--6923
8
11.2
8
68
16
58
50
2
19
27
1.60
6837--6913
24
3.3
24
75
10
81
49
2
20
27
1.62
6847--6999
45
3.6
45
74
16
146
47
2
21
28
1.64
6902--6992
37
2.5
37
85
0
128
45
3
24
27
1.69
6973--7030
8
7.2
8
72
0
53
44
1
24
29
1.63
6973--7029
24
2.4
25
82
5
73
43
1
24
29
1.64
7050--7080
16
1.9
16
93
0
53
41
3
29
25
1.71
8017--8050
17
2.0
17
88
0
50
11
11
0
76
1.02
8025--8061
20
1.9
19
89
10
58
10
10
0
78
0.97
13161--13187
14
1.9
14
100
0
54
22
0
11
66
1.22

Tables:   1

The End!