Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012553.1 Corchorus capsularis cultivar CVL-1 contig12574, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12861

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
150--2269
652
3.3
652
77
8
1693
35
16
14
32
1.90
930--2286
333
4.1
328
78
7
1331
34
16
14
33
1.90
3195--3238
21
2.3
19
81
14
54
61
0
2
36
1.09
4386--4413
2
14.0
2
100
0
56
50
0
0
50
1.00
3538--5644
332
6.3
329
78
7
1748
35
15
14
34
1.88
5387--5897
254
2.0
252
87
4
733
33
17
16
32
1.92
5123--6228
584
1.9
585
86
2
1594
34
16
15
34
1.90
5641--8983
331
10.1
331
85
3
4089
34
16
14
33
1.90
5645--8983
661
5.1
656
83
5
4015
34
16
14
33
1.90
8693--9256
285
2.0
284
91
1
925
33
16
14
35
1.89
8977--12861
331
11.8
332
84
3
4829
34
16
15
33
1.90

Tables:   1

The End!