Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012676.1 Corchorus capsularis cultivar CVL-1 contig12697, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2660

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96--156
32
1.9
32
93
0
104
37
13
9
39
1.77
183--409
36
5.9
36
76
17
204
35
15
10
38
1.82
209--461
44
6.1
44
77
14
277
35
16
9
37
1.82
44--454
80
5.1
80
83
8
488
35
16
9
38
1.82
999--1028
11
2.7
11
100
0
60
76
6
6
10
1.15

Tables:   1

The End!