Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012858.1 Corchorus capsularis cultivar CVL-1 contig12879, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22516

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8580--8698
56
2.0
57
92
7
195
41
10
3
45
1.54
8825--8924
15
6.1
15
70
21
67
36
1
5
58
1.27
8826--8962
68
2.0
68
98
0
265
35
1
5
56
1.32
8830--8989
68
2.4
68
86
4
171
40
2
6
50
1.41
11920--13054
319
3.5
321
85
5
1444
33
15
17
34
1.91
12459--14438
321
6.3
302
81
8
1713
32
14
17
34
1.91
13070--14315
645
1.9
644
84
2
1662
32
15
17
34
1.91
17163--18308
324
3.5
324
86
4
1618
31
16
18
33
1.93
18315--21173
320
8.9
322
85
3
3228
32
15
17
33
1.92
21213--22516
321
4.1
318
84
5
1523
32
16
16
34
1.91

Tables:   1

The End!