Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012946.1 Corchorus capsularis cultivar CVL-1 contig12967, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20791

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5138--5186
21
2.3
21
85
0
62
10
32
28
28
1.90
9055--9463
35
11.8
34
82
5
462
39
7
18
34
1.78
9045--9463
139
3.0
139
82
4
533
40
7
18
34
1.78
9058--9459
104
3.8
104
90
2
567
39
7
18
35
1.78
9448--9474
14
1.9
14
100
0
54
40
0
29
29
1.57
11614--11678
33
2.0
33
81
6
78
29
16
21
32
1.96
12621--12726
53
2.0
53
94
0
185
48
17
10
23
1.78
17864--17906
21
2.0
21
100
0
86
39
18
0
41
1.51
19449--19489
18
2.3
18
84
12
57
34
0
24
41
1.55

Tables:   1

The End!