Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013127.1 Corchorus capsularis cultivar CVL-1 contig13148, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9052

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
682--730
21
2.3
21
100
0
98
42
28
4
24
1.73
970--1066
3
32.3
3
93
0
167
32
3
0
63
1.10
3403--4259
202
4.3
199
83
6
963
35
13
16
33
1.89
3454--4259
400
2.0
393
84
7
1027
35
13
17
33
1.89
4835--4877
21
2.0
21
95
0
77
39
9
13
37
1.78
8425--8471
23
2.0
23
83
4
58
27
2
34
36
1.69
8323--9052
219
3.3
220
90
1
1072
35
8
19
36
1.82

Tables:   1

The End!