Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013163.1 Corchorus capsularis cultivar CVL-1 contig13184, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41375

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2684--2749
33
2.0
33
100
0
132
30
21
27
21
1.98
3066--3330
142
1.9
142
88
3
399
27
17
24
31
1.97
14204--14363
50
3.2
50
94
1
286
46
9
23
20
1.79
14351--14471
31
3.6
31
66
23
82
47
7
21
23
1.76
14311--14603
72
4.1
71
96
0
523
44
9
22
24
1.82
14311--14603
143
2.0
144
95
1
527
44
9
22
24
1.82
14640--15046
42
9.7
42
86
1
564
39
13
21
25
1.90
15056--15227
36
4.6
36
82
7
200
47
11
17
23
1.80
15057--15231
78
2.3
72
82
9
208
48
11
17
23
1.79
15317--15465
37
4.1
37
91
0
219
40
7
30
21
1.81
15481--15564
37
2.3
37
89
2
125
38
9
25
27
1.87
15549--15658
37
3.0
36
74
15
109
53
9
13
23
1.68
15512--15658
73
2.0
74
89
4
226
49
8
17
24
1.74
23411--23460
21
2.4
21
82
0
64
28
24
36
12
1.91
31282--31587
153
2.0
153
99
0
603
37
20
19
21
1.94
31978--32030
27
2.0
27
81
7
63
22
28
16
32
1.96

Tables:   1

The End!