Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013358.1 Corchorus capsularis cultivar CVL-1 contig13379, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26760

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5676--6285
311
2.0
305
84
5
789
39
13
14
31
1.86
7988--9205
332
3.7
327
79
6
1245
37
15
14
33
1.87
7212--9215
664
3.1
650
76
10
1828
37
15
14
33
1.87
11885--11914
15
1.9
16
93
6
53
53
3
0
43
1.17
14951--15003
18
2.9
18
91
0
70
24
35
24
15
1.94
21720--24453
990
2.8
968
81
8
3001
36
16
14
32
1.88
23668--25271
849
1.9
851
81
6
1996
36
15
14
33
1.88
24461--26686
659
3.4
651
77
7
2093
35
17
14
33
1.90

Tables:   1

The End!