Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013617.1 Corchorus capsularis cultivar CVL-1 contig13638, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18798

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1243--1350
36
3.0
36
83
4
119
55
3
21
19
1.58
1329--1613
7
40.6
7
72
8
123
50
6
22
20
1.70
1329--1521
21
8.9
21
76
10
138
49
7
23
20
1.73
1331--1533
28
7.6
28
82
9
226
49
7
23
20
1.74
1324--1548
104
2.2
104
95
0
405
48
6
24
20
1.73
1554--1607
15
3.6
15
78
12
58
59
3
16
20
1.52
1532--1606
29
2.6
29
83
8
98
56
4
18
21
1.58
1568--1724
36
4.5
35
73
10
135
56
3
19
19
1.57
1554--1613
29
2.0
30
83
3
77
58
3
18
20
1.53
1433--1716
14
20.8
14
63
13
63
53
4
21
19
1.63
1633--1747
26
4.2
26
79
12
124
57
3
19
20
1.55
1699--1745
21
2.2
21
88
0
67
51
4
21
23
1.65
1727--1887
27
5.7
27
75
15
125
54
3
23
18
1.60
7702--8535
422
2.0
422
97
0
1578
27
19
22
31
1.98
14304--14333
14
2.1
14
100
0
60
33
20
13
33
1.91

Tables:   1

The End!