Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013815.1 Corchorus capsularis cultivar CVL-1 contig13836, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13838

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1858--1925
35
1.9
35
82
5
84
38
16
8
36
1.80
1954--2428
43
10.8
43
76
16
449
37
18
7
37
1.78
2031--2272
99
2.5
99
96
0
441
37
19
6
37
1.78
2173--2278
55
1.9
56
96
1
196
37
18
5
37
1.75
2232--2456
35
6.0
35
83
10
227
37
19
8
35
1.81
2241--2334
19
5.3
19
64
14
65
36
20
9
34
1.85
3300--3400
52
1.9
52
81
0
121
37
15
4
41
1.69
3389--3687
50
6.1
49
90
4
426
37
19
5
37
1.75
3427--3687
49
5.3
49
93
2
391
37
18
4
38
1.73
3390--3685
97
3.0
97
87
6
409
37
19
5
37
1.75
3687--3744
31
1.9
30
82
10
73
32
13
6
46
1.70

Tables:   1

The End!