Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013876.1 Corchorus capsularis cultivar CVL-1 contig13897, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8300

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1218--1764
35
16.2
35
80
10
640
38
10
19
31
1.85
1218--1764
66
8.1
67
83
8
584
38
10
19
31
1.85
1218--1745
101
5.2
101
92
3
707
38
10
19
32
1.85
1736--1774
21
1.9
20
89
5
60
35
7
23
33
1.83
1740--1785
21
2.2
21
84
7
58
39
10
17
32
1.84
3666--3814
75
2.0
74
96
1
271
19
15
24
40
1.90

Tables:   1

The End!