Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013939.1 Corchorus capsularis cultivar CVL-1 contig13960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25262

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3075--3118
20
2.2
20
92
8
72
54
9
0
36
1.32
4223--5218
199
5.0
199
83
6
1241
34
13
18
33
1.90
5153--5282
64
2.0
64
96
0
242
35
16
10
36
1.84
4954--5481
263
2.0
263
86
3
733
35
14
15
34
1.88
5217--5898
199
3.4
197
80
5
765
33
13
17
35
1.89
5737--6082
173
2.0
173
97
0
656
32
14
16
36
1.89
6359--6756
200
2.0
200
86
2
550
33
12
19
33
1.90
7653--7692
2
19.5
2
94
5
71
47
2
0
50
1.14
7893--7930
20
1.9
20
88
0
58
21
42
10
26
1.85
17604--17961
199
1.8
198
83
0
473
34
12
18
34
1.89
18268--18635
193
1.9
195
85
5
519
33
11
18
35
1.88
20633--20668
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!