Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014105.1 Corchorus capsularis cultivar CVL-1 contig14126, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29905

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2511--2590
33
2.4
33
89
0
115
21
40
30
8
1.83
2533--2617
33
2.6
32
85
10
109
21
43
28
7
1.78
3804--3990
36
5.4
35
72
19
169
27
17
9
45
1.78
3825--4000
32
5.2
32
73
15
158
27
18
8
45
1.78
3813--4000
68
2.8
68
94
1
315
27
17
8
46
1.77
3989--4646
35
18.5
37
83
7
239
24
21
10
43
1.83
4004--4811
36
22.8
35
85
4
968
25
21
10
42
1.84
3989--4811
71
11.6
69
88
6
1058
24
21
10
43
1.84
4836--4987
40
3.8
40
83
0
187
26
15
9
48
1.75
4836--4985
80
1.9
80
85
0
210
26
15
9
48
1.75
11982--12040
30
2.0
30
86
6
84
23
28
16
30
1.97
12383--12490
33
3.3
33
94
1
182
44
18
10
26
1.82
12383--12523
66
2.2
65
81
3
158
42
19
9
28
1.83
12520--12617
33
3.0
32
79
8
99
41
20
10
27
1.84
16207--16239
18
1.9
17
88
11
50
42
24
0
33
1.55

Tables:   1

The End!