Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014190.1 Corchorus capsularis cultivar CVL-1 contig14211, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29733

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1426--1455
15
2.0
15
100
0
60
40
0
13
46
1.43
3147--3212
5
13.0
5
85
7
89
42
1
0
56
1.08
4489--6551
765
2.7
764
93
1
3441
26
14
16
41
1.87
10548--11094
35
15.8
35
81
6
580
41
12
18
26
1.86
10548--11070
103
5.0
104
84
6
593
41
13
18
26
1.87
10833--11132
102
2.9
101
81
5
239
43
13
17
26
1.85
11156--11298
36
3.9
36
86
0
205
46
6
20
25
1.75
13342--13386
21
2.1
21
91
0
72
26
22
46
4
1.70
13352--13394
21
2.0
21
86
0
59
27
18
51
2
1.59
17584--17635
14
3.6
14
77
15
52
3
19
1
75
1.06
19472--19498
14
1.9
14
100
0
54
37
0
44
18
1.50
20684--20802
31
3.8
31
93
1
193
38
31
10
18
1.86
20826--20911
45
1.9
45
97
0
163
31
27
16
24
1.96
28120--28169
3
16.7
3
100
0
100
68
0
0
32
0.90
28889--29056
36
4.7
36
85
4
180
29
20
32
17
1.96

Tables:   1

The End!