Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014214.1 Corchorus capsularis cultivar CVL-1 contig14235, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32849

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1244--1282
14
2.8
14
84
11
53
33
17
7
41
1.79
2612--2641
12
2.5
12
94
0
51
23
33
33
10
1.88
2637--2696
30
2.0
30
93
0
102
20
45
25
10
1.81
9147--9206
30
2.0
30
86
0
84
21
43
23
11
1.85
11956--11984
13
2.1
14
93
6
51
48
10
20
20
1.79
13932--13969
15
2.5
15
91
0
58
44
15
39
0
1.47
20568--20627
21
2.9
21
74
0
66
36
11
20
31
1.88
25943--26116
36
5.0
36
83
6
198
27
23
9
39
1.85
25945--26117
71
2.5
71
84
4
228
27
23
9
39
1.85
26143--26263
36
3.4
35
87
4
152
23
14
12
50
1.76
26062--26981
41
24.6
36
82
9
351
23
19
11
46
1.82
26242--26683
41
11.0
41
89
3
663
21
20
12
45
1.83
26668--26981
36
8.7
36
86
2
398
24
20
9
45
1.80
26668--26981
72
4.3
72
86
3
443
24
20
9
45
1.80
27220--27255
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!