Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014376.1 Corchorus capsularis cultivar CVL-1 contig14397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8865

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
655--792
35
4.0
34
93
5
233
34
17
7
41
1.77
655--796
70
2.0
69
97
1
266
33
18
7
40
1.77
868--1085
35
6.1
35
78
11
219
31
18
9
40
1.83
570--1014
224
2.0
225
93
4
765
30
20
7
41
1.80
875--1094
73
3.1
73
84
6
238
30
19
10
39
1.85
1764--1822
23
2.5
24
71
13
59
57
16
11
13
1.65
5322--5591
36
7.6
35
73
3
175
38
27
17
17
1.92
5322--5597
71
3.9
71
86
2
358
38
26
17
17
1.92
5361--5638
71
3.9
71
85
2
355
38
25
18
17
1.93
5666--5763
35
2.8
35
82
1
126
37
18
20
23
1.94
7207--7927
49
14.7
48
79
6
527
32
16
28
22
1.96
7405--7929
245
2.1
245
89
3
806
31
17
28
23
1.96

Tables:   1

The End!